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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0031s0169.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | B3 | ||||||||
Protein Properties | Length: 284aa MW: 31786.2 Da PI: 7.9374 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.9 | 1.4e-16 | 7 | 97 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 ffk+ p d+++ ++ +p +f+ + + + ++ ++ l + g++W+v + ++++ +++t+GWk Fvk+ng+ g f++F++ g ++f Kaladp0031s0169.1.p 7 FFKIYFPDDSSE--IMKMPEEFVGHLKADYKGCRQAYLVGPGGEEWRVGF--ARCGNDCFFTDGWKTFVKDNGVAYGHFLLFRYRGGMRF-- 92 677776655554..589******666666668889***************..********************************998999.. PP EEEEE CS B3 93 vvkvf 97 +v +f Kaladp0031s0169.1.p 93 KVNIF 97 88777 PP | |||||||
2 | B3 | 49.1 | 1.1e-15 | 199 | 280 | 16 | 98 |
EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l + k+f++e+ + k++++ l+l++++g W++++ + + ++l +GW +F ++n+++ gD++vF+ ++s+ el+v+vf Kaladp0031s0169.1.p 199 LHILKSFFSENsVICKPSDRHLVLRTRHGGCWSLTI--NHGTYVHTLCDGWASFLRDNNVENGDVCVFEIADSSKLELLVHVFH 280 58999******9555678889***************..88888899***********************8877*********96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd10017 | 6.82E-16 | 5 | 97 | No hit | No description |
PROSITE profile | PS50863 | 13.014 | 5 | 100 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 5.89E-20 | 5 | 100 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.0E-20 | 5 | 100 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 3.5E-12 | 7 | 100 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 8.1E-14 | 7 | 97 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 2.6E-14 | 179 | 279 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.04E-13 | 184 | 280 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.646 | 184 | 282 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 9.0E-5 | 191 | 282 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.58E-7 | 199 | 279 | No hit | No description |
Pfam | PF02362 | 1.3E-12 | 199 | 280 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence Send to blast |
MDLLPVFFKI YFPDDSSEIM KMPEEFVGHL KADYKGCRQA YLVGPGGEEW RVGFARCGND 60 CFFTDGWKTF VKDNGVAYGH FLLFRYRGGM RFKVNIFTPS GLESEAAFTA KCTQGWKNNG 120 AEKGQSSNNG GQVLPACCLV KPSADEGTSR RPGKRPKGES HSISFMMSAA EQRVADVFSS 180 VHPFIIRQMN FERSQMPVLH ILKSFFSENS VICKPSDRHL VLRTRHGGCW SLTINHGTYV 240 HTLCDGWASF LRDNNVENGD VCVFEIADSS KLELLVHVFH SPF* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 1e-14 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0031s0169.1.p |